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Musa Genomics Home > Research > Bioinformatics

Bioinformatics

Databases and software developments

  • Development of databases to store and handle genetic resources (MGIS), genetic data (TropGENE DB) and genomic data (data_Musa) (INIBAP, CIRAD, EMBRAPA).
  • Development of Biomoby services to improve interoperability and data integration of databases (CIRAD, INIBAP)
  • Development of software tools, Genoma, for storage, annotation and analysis of EST (EMBRAPA)
  • Development of a web-based infrastructure for the management of the genomics resources (Bioversity)
  • Development of a web-based infrastructure based on GBrowse to visualize sequence annotations (Bioversity) 

Annotation

  • Annotation and analysis of 17 BACs sequenced (TIGR)  

Comparative analysis

  • Analysis of 17 BAC sequences � analysis of syntenic relationships between Musa and rice and genome A and B (CIRAD, TIGR, EMBRAPA, UCB)
  • Analysis of resistance genes analogs (RGAs) in M. acuminata (EMBRAPA, UCB)  

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